The detailed information of tRNA gene sequence


Sequence ID>A171002353
Genome IDCP002792
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanothermococcus okinawensis IH1 [CP002792]
Start position on genome 581262
End posion on genome 581185
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aagttaaaga
tRNA gene sequence 
AGCGGGGTAGGGTAGCCAGGCCCATCCCGCCGGGCTCATAACCCGGAGATCCGAAGTTCA
AATCTTCGCCCCGCTACCt
Downstream region at tRNA end position 
atttttaatg
Secondary structure (Cloverleaf model)
>A171002353	Met	CAT
                   a      ACCt atttttaatg
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G C T T C     A
    C C G A        A      | | | | |     A
  A         T G G G       C G A A G     C
  G           | | |                 T T
  G         T C C C
    C C C A        G     AGATC
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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