The detailed information of tRNA gene sequence


Sequence ID>A171002356
Genome IDCP002792
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanothermococcus okinawensis IH1 [CP002792]
Start position on genome 348431
End posion on genome 348346
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
aagtaattga
tRNA gene sequence 
GCAGGGGTTGCCAAGCCTGGCCAACGGCGCTGGACTTAAGATCCAGTCCCATAGGGGTTC
GGGGGTTCAAATCCCCTCCCCTGCACta
Downstream region at tRNA end position 
tttttatttt
Secondary structure (Cloverleaf model)
>A171002356	Leu	TAA
                   a      ACta tttttatttt
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T C C C C     A
    C C G A        T      + | | | |     A
  T         A C C G       G G G G G     C
  G           | | |                 T T
  G         C G G C
    C C A A        G     TCCCATAGGGGTTC
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.-

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