The detailed information of tRNA gene sequence


Sequence ID>A171002399
Genome IDCP002818
Search identical group
Phylum/ClassThermoproteota
SpeciesSulfolobus acidocaldarius Ron12/I [CP002818]
Start position on genome 542647
End posion on genome 542561
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tcttattaaT
tRNA gene sequence 
GCCGGGGTGCCCGAGTGGACTAAGGGGCTGGCCTGGAGAGCCAGTGTGGATCTTCCACGC
GCGGGTTCAAATCCCGCCCCCGGCGTag
Downstream region at tRNA end position 
tgggggattc
Secondary structure (Cloverleaf model)
>A171002399	Ser	GGA
                   T      GTag tgggggattc
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     A
    G       G C C C       G C G G G     C
    G         | | |                 T T
    A       A G G G
      C T A        G     TGTGGATCTTCCACGC
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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