The detailed information of tRNA gene sequence


Sequence ID>A171002421
Genome IDCP002838
Search identical group
Phylum/ClassThermoproteota
SpeciesPyrolobus fumarii 1A [CP002838]
Start position on genome 888789
End posion on genome 888866
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
cacggagtgt
tRNA gene sequence 
GGGCCCGTCGTCTAGCCTGGTTAGGACGCCGCCCTGACGAGGCGGAGGTCCGGGGTTCAA
ATCCCCGCGGGCCCACCA
Downstream region at tRNA end position 
cacgataaca
Secondary structure (Cloverleaf model)
>A171002421	Val	GAC
                   t      ACCA cacgataaca
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G C C C C     A
    C C G A        C      | | | | |     A
  T         T C T G       C G G G G     C
  G         + | | |                 T T
  G         G G A C
    T T A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       G
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.-

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