The detailed information of tRNA gene sequence


Sequence ID>A171002445
Genome IDCP002839
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalopiger xanaduensis SH-6 [CP002839]
Start position on genome 198654
End posion on genome 198737
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
acgaccgcgt
tRNA gene sequence 
GCGAGGGTAGCCAAGCGGTCAACGGCGGCGGACTCAAGATCCGCTCCCGTAGGGGTTCGT
GGGTTCGATTCCCTCCCCTCGCACtg
Downstream region at tRNA end position 
caacagtgcg
Secondary structure (Cloverleaf model)
>A171002445	Leu	CAA
                   t      ACtg caacagtgcg
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C          T T
                    T     C T C C C     A
      C G A        A      |   | | |     G
    G       A C C G       G T G G G     C
    G         | | |                 T T
    T       C G G C
      C A A        G     TCCCGTAGGGGTTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.-

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