The detailed information of tRNA gene sequence


Sequence ID>A171002458
Genome IDCP002839
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalopiger xanaduensis SH-6 [CP002839]
Start position on genome 3038741
End posion on genome 3038811
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
cggggagtgc
tRNA gene sequence 
GCGCGGATGGTCTAGTGGTAGGACCTGAGCCTTCCAAGCTCATGGCCCGGGTTCAAATCC
CGGTCCGCGCAttt
Downstream region at tRNA end position 
ctgtgcgcgc
Secondary structure (Cloverleaf model)
>A171002458	Gly	TCC
                   c      Attt ctgtgcgcgc
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T          T A
                    T     G G C C C     A
        G A        G      | | | | |     A
      T     T C T G       C C G G G     C
      G     + | | |                 T T
      G     G G A C
        T A        C     TGGC
                    T - A
                    G - C
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.-

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