The detailed information of tRNA gene sequence


Sequence ID>A171002460
Genome IDCP002839
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalopiger xanaduensis SH-6 [CP002839]
Start position on genome 3486022
End posion on genome 3486106
Amino Acid Leu
Anticodon GAG
Upstream region at tRNA start position 
gacacagcga
tRNA gene sequence 
GCGTGGGTAGCCAAGCCAGGCCAACGGCGCAGCGTTGAGGGCGCTGTCCCGTAGGGGTCC
GCCGGTTCGAATCCGGTCCCACGCAtcg
Downstream region at tRNA end position 
cacgggtgga
Secondary structure (Cloverleaf model)
>A171002460	Leu	GAG
                   a      Atcg cacgggtgga
                     G - C
                     C - G
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C          T A
                    T     T G G C C     A
    C C G A        A      + | | | |     G
  A         A C C G       G C C G G     C
  G           | | |                 T T
  G         C G G C
    C C A A        G     TCCCGTAGGGGTCC
                    C - G
                    A - T
                    G - C
                    C - G
                    G - C
                  T       G
                  T       G
                    G A G
Intron
Comment/Decision
Genome/Seq. Info.-

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