The detailed information of tRNA gene sequence


Sequence ID>A171002470
Genome IDCP002839
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalopiger xanaduensis SH-6 [CP002839]
Start position on genome 1201038
End posion on genome 1200965
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
gtgcgaacgc
tRNA gene sequence 
GGGCCGATAGCTCAATTAGGTTGAGCGCCACTCTGATAAGGTGGAGGCTCTCGGTTCAAA
TCCGAGTCGGCCCAtac
Downstream region at tRNA end position 
ttctgtggcg
Secondary structure (Cloverleaf model)
>A171002470	Ile	GAT
                   c      Atac ttctgtggcg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T          T A
                    T     G A G C C     A
      T A A        A      | | | | |     A
    T       C T C G       C T C G G     C
    A       | | | |                 T T
    G       G A G C
      G T T        G     AGGCT
                    C - G
                    C - G
                    A - T
                    C - G
                    T + G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.-

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