The detailed information of tRNA gene sequence


Sequence ID>A171002484
Genome IDCP002839
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalopiger xanaduensis SH-6 [CP002839]
Start position on genome 55431
End posion on genome 55347
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
ggaagtgcga
tRNA gene sequence 
GCAGGGATAGCCAAGTCAGGCCAACGGCGCAGCGTTCAGGGCGCTGTCTCGTAGGAGTCC
GCAGGTTCAAATCCTGCTCCCTGCAtca
Downstream region at tRNA end position 
atcccacttc
Secondary structure (Cloverleaf model)
>A171002484	Leu	CAG
                   a      Atca atcccacttc
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C G T C C     A
    C T G A        A      | | | | |     A
  A         A C C G       G C A G G     C
  G           | | |                 T T
  G         C G G C
    C C A A        G     TCTCGTAGGAGTCC
                    C - G
                    A - T
                    G - C
                    C - G
                    G - C
                  T       G
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.-

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