The detailed information of tRNA gene sequence


Sequence ID>A171002486
Genome IDCP002839
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalopiger xanaduensis SH-6 [CP002839]
Start position on genome 13058
End posion on genome 12973
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
atcggagtga
tRNA gene sequence 
GCCGAGATAGCCTAGCCCGGCCAAGGCGGCAGATTCGAAATCTGCTGTCCTCACGGACTC
GGGAGTTCAAATCTCCCTCTCGGCGCtt
Downstream region at tRNA end position 
ttgcagcaac
Secondary structure (Cloverleaf model)
>A171002486	Ser	CGA
                   a      GCtt ttgcagcaac
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C T C     A
    C C G A        A      | | | | |     A
  C         T C C G       G G G A G     C
  G         | | | |                 T T
  G         A G G C
    C C A          G     TGTCCTCACGGACTC
                    G - C
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.-

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