The detailed information of tRNA gene sequence


Sequence ID>A171002506
Genome IDCP002913
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanococcus maripaludis X1 [CP002913]
Start position on genome 1686816
End posion on genome 1686742
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gaccgggtac
tRNA gene sequence 
GGGCCCGTAGCTCAGGCTGGTTAGAGTGCTCGGCTCATAACCGAGTGGTCATGGGTTCAA
ATCCCATCGGGCCCAtat
Downstream region at tRNA end position 
atttgaaaca
Secondary structure (Cloverleaf model)
>A171002506	Met	CAT
                   c      Atat atttgaaaca
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T A C C C     A
    C G G A        A      | | | | |     A
  T         C T C G       A T G G G     C
  G         | | | +                 T T
  G         G A G T
    T T A          G     TGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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