The detailed information of tRNA gene sequence


Sequence ID>A171002523
Genome IDCP002916
Search identical group
Phylum/ClassUnclassified
SpeciesThermoplasmatales archaeon BRNA1 [CP002916]
Start position on genome 226111
End posion on genome 226193
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
cggacgcgct
tRNA gene sequence 
GCGGGAGTATTCGAGTGGCCAAAGAAGTCGGACTTAAGATCCGGTCCCTAGCGGTTCGGG
GGTTCGAATCCCCTCTCCCGCACtc
Downstream region at tRNA end position 
ggtttgacct
Secondary structure (Cloverleaf model)
>A171002523	Leu	TAA
                   t      ACtc ggtttgacct
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T C C C C     A
      T G A        A      + | | | |     G
    G       G C T T       G G G G G     C
    G         | | |                 T T
    C       A G A A
      C A A        G     TCCCTAGCGGTTC
                    T + G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.-

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