The detailed information of tRNA gene sequence


Sequence ID>A171002524
Genome IDCP002916
Search identical group
Phylum/ClassUnclassified
SpeciesThermoplasmatales archaeon BRNA1 [CP002916]
Start position on genome 347072
End posion on genome 347145
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
gtggtttact
tRNA gene sequence 
GGGCAGTTAGATCAGCTGGAAGATCGCCTGCTTTGCAAGCAGGAGGTCGTGGGTTCAAAT
CCCACACTGTCCACtc
Downstream region at tRNA end position 
attttatctg
Secondary structure (Cloverleaf model)
>A171002524	Ala	TGC
                   t      ACtc attttatctg
                     G - C
                     G - C
                     G + T
                     C - G
                     A - T
                     G - C
                     T - A          T A
                    T     C A C C C     A
      C G A        A      | | | | |     A
    T       C T A G       G T G G G     C
    G       | | | |                 T T
    G       G A T C
      A A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.-

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