The detailed information of tRNA gene sequence


Sequence ID>A171002525
Genome IDCP002916
Search identical group
Phylum/ClassUnclassified
SpeciesThermoplasmatales archaeon BRNA1 [CP002916]
Start position on genome 370349
End posion on genome 370434
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
ggctctcaaa
tRNA gene sequence 
GCCGACGTAGCCGAGCTGGCCAAAGGCGGAAGACTCAAGATCTTTTCCCTAGCGGTTCAC
CGGTTCGAATCCGGTCGTCGGCACCA
Downstream region at tRNA end position 
attcatcaac
Secondary structure (Cloverleaf model)
>A171002525	Leu	CAA
                   a      ACCA attcatcaac
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T G G C C     A
    T C G A        A      | | | | |     G
  G         G C C G       A C C G G     C
  G           | | |                 T T
  C         A G G C
    C A A          G     TCCCTAGCGGTTC
                    G + T
                    A - T
                    A - T
                    G - C
                    A - T
                  C       A
                  T       G
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.-

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