The detailed information of tRNA gene sequence


Sequence ID>A171002530
Genome IDCP002916
Search identical group
Phylum/ClassUnclassified
SpeciesThermoplasmatales archaeon BRNA1 [CP002916]
Start position on genome 984542
End posion on genome 984616
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
ctacacatgt
tRNA gene sequence 
GTGGACGTGGTGTAGCTGGTTATCACTTAACCTTGCCAAGGTTAGAACTCGGGTTCGAAT
CCCGGCGTCCGCACCt
Downstream region at tRNA end position 
cataccttta
Secondary structure (Cloverleaf model)
>A171002530	Gly	GCC
                   t      ACCt cataccttta
                     G - C
                     T + G
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     G G C C C     A
      C G A        G      + | | | |     G
    T       T G T G       T C G G G     C
    G         | | |                 T T
    G       T C A C
      T T A        T     GAAC
                    T - A
                    A - T
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.-

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