The detailed information of tRNA gene sequence


Sequence ID>A171002536
Genome IDCP002916
Search identical group
Phylum/ClassUnclassified
SpeciesThermoplasmatales archaeon BRNA1 [CP002916]
Start position on genome 1341541
End posion on genome 1341616
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
agggacttaa
tRNA gene sequence 
GGGCCCGTGGTCTAGGGGTTATGACGTCACATTGACATTGTGAAGGTCGCCAGTTCAAAT
CTGGCCGGGCCCACCA
Downstream region at tRNA end position 
tcctcttctt
Secondary structure (Cloverleaf model)
>A171002536	Val	GAC
                   a      ACCA tcctcttctt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C G G T C     A
      G G A        G      | | | | |     A
    G       T C T G       G C C A G     C
    G         | | |                 T T
    T       T G A C
      T A          G     AGGTC
                    T - A
                    C - G
                    A - T
                    C - G
                    A - T
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.-

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