The detailed information of tRNA gene sequence


Sequence ID>A171002539
Genome IDCP002916
Search identical group
Phylum/ClassUnclassified
SpeciesThermoplasmatales archaeon BRNA1 [CP002916]
Start position on genome 1417088
End posion on genome 1417162
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
accgtccgac
tRNA gene sequence 
GGGCCCTTAGCTTAGTCGGTTAGAGCGTCCGACTCATAATCGGACGGTCACCGGTTCGAA
TCCGGTAGGGCCCACta
Downstream region at tRNA end position 
ccgttcggtt
Secondary structure (Cloverleaf model)
>A171002539	Met	CAT
                   c      ACta ccgttcggtt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     T G G C C     A
      T G A        A      | | | | |     G
    C       T T C G       A C C G G     C
    G       + | | |                 T T
    G       G A G C
      T T A        G     CGGTC
                    T - A
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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