The detailed information of tRNA gene sequence


Sequence ID>A171002540
Genome IDCP002916
Search identical group
Phylum/ClassUnclassified
SpeciesThermoplasmatales archaeon BRNA1 [CP002916]
Start position on genome 1430398
End posion on genome 1430326
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
acagaatcgt
tRNA gene sequence 
GCCACTGTGGCTCAGAGGTGGAGCGACGGTTTCGTAAACCGTTGGTCGGGGGTTCGATTC
CCTCCAGTGGCTCtt
Downstream region at tRNA end position 
ttcaagtaca
Secondary structure (Cloverleaf model)
>A171002540	Thr	CGT
                   t      TCtt ttcaagtaca
                     G - C
                     C - G
                     C - G
                     A - T
                     C - G
                     T - A
                     G - C          T T
                    T     C T C C C     A
        G A        G      | + | | |     G
      A     C T C G       G G G G G     C
      G     | | | |                 T T
      G     G A G C
        T G        G     TGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.-

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