The detailed information of tRNA gene sequence


Sequence ID>A171002543
Genome IDCP002916
Search identical group
Phylum/ClassUnclassified
SpeciesThermoplasmatales archaeon BRNA1 [CP002916]
Start position on genome 1378260
End posion on genome 1378184
Amino Acid Arg
Anticodon GCG
Upstream region at tRNA start position 
caaaatacac
tRNA gene sequence 
GGACGTATGGGGTAGCTTGGATATCCTGAGAGCTTGCGGAGCTTTTGACTTGGGTTCGAA
TCCCAGTACGTCCGCCA
Downstream region at tRNA end position 
taccttcttt
Secondary structure (Cloverleaf model)
>A171002543	Arg	GCG
                   c      GCCA taccttcttt
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C
                     T - A
                     A - T          T A
                    T     G A C C C     A
    T C G A        G      + | | | |     G
  T         T G G G       T T G G G     C
  G           | | +                 T T
  G         T C C T
    A T A          G     TGAC
                    A - T
                    G + T
                    A - T
                    G - C
                    C - G
                  T       A
                  T       G
                    G C G
Intron
Comment/Decision
Genome/Seq. Info.-

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