The detailed information of tRNA gene sequence


Sequence ID>A171002544
Genome IDCP002916
Search identical group
Phylum/ClassUnclassified
SpeciesThermoplasmatales archaeon BRNA1 [CP002916]
Start position on genome 1376101
End posion on genome 1376029
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
gaactaccgt
tRNA gene sequence 
GCCGCTGTGGCTAAGGGGTATAGCGACGCCTTGGTAAGGCGTAGGCCGAGGGTTCAATTC
CCTCCAGCGGCTCtc
Downstream region at tRNA end position 
atttttctca
Secondary structure (Cloverleaf model)
>A171002544	Thr	GGT
                   t      TCtc atttttctca
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     T - A
                     G - C          T T
                    T     C T C C C     A
        G A        G      | | | | |     A
      G     A T C G       G A G G G     C
      G     | | | |                 T T
      G     T A G C
        T A        G     AGGCC
                    A - T
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.-

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