The detailed information of tRNA gene sequence


Sequence ID>A171002546
Genome IDCP002916
Search identical group
Phylum/ClassUnclassified
SpeciesThermoplasmatales archaeon BRNA1 [CP002916]
Start position on genome 1332641
End posion on genome 1332555
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
gaatgcaagt
tRNA gene sequence 
GCAAGAGTAGTCAAGCCTGGCCAACGACGCTAGATTCAGGGTCTAGTCCTTAGCGGTCCA
TGGGTTCAAATCCCACCTCTTGCACCA
Downstream region at tRNA end position 
cttcttctga
Secondary structure (Cloverleaf model)
>A171002546	Leu	CAG
                   t      ACCA cttcttctga
                     G - C
                     C - G
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    T     C A C C C     A
    C C G A        A        | | | |     A
  T         A C T G       A T G G G     C
  G           | | |                 T T
  G         C G A C
    C C A A        G     TCCTTAGCGGTCC
                    C - G
                    T - A
                    A - T
                    G - C
                    A - T
                  T       G
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.-

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