The detailed information of tRNA gene sequence


Sequence ID>A171002547
Genome IDCP002916
Search identical group
Phylum/ClassUnclassified
SpeciesThermoplasmatales archaeon BRNA1 [CP002916]
Start position on genome 1306797
End posion on genome 1306724
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
gtcgcatcgc
tRNA gene sequence 
GCTCTAGTGGTGTAGCGGCCAATCATCCGGCCCTTTCGAGGCCGGGACCCGGGTTCGAAT
CCCGTCTAGAGCACtc
Downstream region at tRNA end position 
acttctacca
Secondary structure (Cloverleaf model)
>A171002547	Glu	TTC
                   c      ACtc acttctacca
                     G - C
                     C - G
                     T - A
                     C - G
                     T - A
                     A - T
                     G - C          T A
                    T     T G C C C     A
      C G A        G        | | | |     G
    G       T G T G       C C G G G     C
    G         | | +                 T T
    C       T C A T
      C A A        C     GGAC
                    C - G
                    G - C
                    G - C
                    C - G
                    C - G
                  C       A
                  T       G
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.-

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