The detailed information of tRNA gene sequence


Sequence ID>A171002548
Genome IDCP002916
Search identical group
Phylum/ClassUnclassified
SpeciesThermoplasmatales archaeon BRNA1 [CP002916]
Start position on genome 1268739
End posion on genome 1268666
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
ttacacaaca
tRNA gene sequence 
GGGCCCTTGGGGTAGCTTGGTATCCTTCATGCTTGGGGTGCATGTGACTCCAGTTCAAAT
CTGGGGGGGCCCACtc
Downstream region at tRNA end position 
tttacacatc
Secondary structure (Cloverleaf model)
>A171002548	Pro	GGG
                   a      ACtc tttacacatc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     T + G          T A
                    T     G G G T C     A
      C G A        G      + | | | |     A
    T       T G G G       T C C A G     C
    T         | | +                 T T
    G       T C C T
      G T A        T     TGAC
                    C - G
                    A - T
                    T - A
                    G - C
                    C - G
                  T       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.-

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