The detailed information of tRNA gene sequence


Sequence ID>A171002550
Genome IDCP002916
Search identical group
Phylum/ClassUnclassified
SpeciesThermoplasmatales archaeon BRNA1 [CP002916]
Start position on genome 1163094
End posion on genome 1163021
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
cagtcatact
tRNA gene sequence 
GCTCCTGTGGTGTAGCGGCCAATCATGAAGCCCTCTCGAGGCTTCGACACGGGTTCAAAT
CCCGTCGGGAGCACtc
Downstream region at tRNA end position 
atgtcctttt
Secondary structure (Cloverleaf model)
>A171002550	Glu	CTC
                   t      ACtc atgtcctttt
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     T + G
                     G - C          T A
                    T     T G C C C     A
      C G A        G      | | | | |     A
    G       T G T G       A C G G G     C
    G         | | +                 T T
    C       T C A T
      C A A        G     CGAC
                    A - T
                    A - T
                    G - C
                    C - G
                    C - G
                  C       A
                  T       G
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.-

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