The detailed information of tRNA gene sequence


Sequence ID>A171002551
Genome IDCP002916
Search identical group
Phylum/ClassUnclassified
SpeciesThermoplasmatales archaeon BRNA1 [CP002916]
Start position on genome 951000
End posion on genome 950923
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
cagaataagt
tRNA gene sequence 
GGGCCCATAGCTTAGCACGGCTCGAGCGTCCGACTGATAATCGGAAGGTCACCGGTTCAA
ATCCGGTTGGGCCCACCA
Downstream region at tRNA end position 
ctgcacgttt
Secondary structure (Cloverleaf model)
>A171002551	Ile	GAT
                   t      ACCA ctgcacgttt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T G G C C     A
    A C G A        A      | | | | |     A
  C         T T C G       A C C G G     C
  G         + | | |                 T T
  G         G A G C
    C T C          G     AGGTC
                    T - A
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.-

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