The detailed information of tRNA gene sequence


Sequence ID>A171002552
Genome IDCP002916
Search identical group
Phylum/ClassUnclassified
SpeciesThermoplasmatales archaeon BRNA1 [CP002916]
Start position on genome 908370
End posion on genome 908296
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
cagaatcgct
tRNA gene sequence 
GTCGGGGTAACACAGCGGCTTATGTGGCGGACTGCAGATCCGCATACGGGAGTTCAACTC
TCCCTCCCGACTCCA
Downstream region at tRNA end position 
ttttgacttt
Secondary structure (Cloverleaf model)
>A171002552	Cys	GCA
                   t      TCCA ttttgacttt
                     G - C
                     T - A
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T          T C
                    T     C C C T C     A
      C G A        A      | | | | |     A
    G       C A C A       G G G A G     C
    G         | | |                 T T
    C       A T G T
      T T          G     ATAC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.-

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