The detailed information of tRNA gene sequence


Sequence ID>A171002554
Genome IDCP002916
Search identical group
Phylum/ClassUnclassified
SpeciesThermoplasmatales archaeon BRNA1 [CP002916]
Start position on genome 843180
End posion on genome 843104
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
gaattctaat
tRNA gene sequence 
GGGCAAGTGACGCAGCCCGGTAGCGTGCTGCCTTCGCAAGGCAGAAGTCGCGAGTTCGAA
TCTCGCCTTGTCCACCA
Downstream region at tRNA end position 
tctgtaatag
Secondary structure (Cloverleaf model)
>A171002554	Ala	CGC
                   t      ACCA tctgtaatag
                     G - C
                     G - C
                     G + T
                     C - G
                     A - T
                     A - T
                     G - C          T A
                    T     C G C T C     A
      C G A        G      | | | | |     G
    C       C G C A       G C G A G     C
    C       | | | |                 T T
    G       G C G T
      G T A        G     AAGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.-

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