The detailed information of tRNA gene sequence


Sequence ID>A171002559
Genome IDCP002916
Search identical group
Phylum/ClassUnclassified
SpeciesThermoplasmatales archaeon BRNA1 [CP002916]
Start position on genome 333829
End posion on genome 333744
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cagactgccc
tRNA gene sequence 
GTGGGGGTGGCCCAGCCTGGTAAGGCGCCAGACTGCTAATCTGGTGCTCTATGAGCTCGG
GGGTTCGAATCCCTCCCTCCACGCCA
Downstream region at tRNA end position 
tccactctat
Secondary structure (Cloverleaf model)
>A171002559	Ser	GCT
                   c      GCCA tccactctat
                     G - C
                     T - A
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    C       C C C G       G G G G G     C
    T         | | |                 T T
    G       A G G C
      G T A        G     TGCTCTATGAGCTC
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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