The detailed information of tRNA gene sequence


Sequence ID>A171002560
Genome IDCP002916
Search identical group
Phylum/ClassUnclassified
SpeciesThermoplasmatales archaeon BRNA1 [CP002916]
Start position on genome 222254
End posion on genome 222179
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gacacccaac
tRNA gene sequence 
GGACTCATGGTCTAGGGGTTATGACGTCGCCTTCACACGGCGGAGGTCGCCGGTTCAAAT
CCGGCTGGGTCCACCA
Downstream region at tRNA end position 
tactttccat
Secondary structure (Cloverleaf model)
>A171002560	Val	CAC
                   c      ACCA tactttccat
                     G - C
                     G - C
                     A - T
                     C - G
                     T + G
                     C - G
                     A - T          T A
                    T     C G G C C     A
      G G A        G      | | | | |     A
    G       T C T G       G C C G G     C
    G         | | |                 T T
    T       T G A C
      T A          G     AGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.-

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