The detailed information of tRNA gene sequence


Sequence ID>A171002562
Genome IDCP002916
Search identical group
Phylum/ClassUnclassified
SpeciesThermoplasmatales archaeon BRNA1 [CP002916]
Start position on genome 121187
End posion on genome 121111
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
gggttcgcac
tRNA gene sequence 
GGGCCTGTAGCTCAGCTAGGTAGAGCGTCCGACTCTTAATCGGACGGCCAAGGGTTCGAA
TCCCTTCAGGCCCGCCA
Downstream region at tRNA end position 
tgtctttgtc
Secondary structure (Cloverleaf model)
>A171002562	Lys	CTT
                   c      GCCA tgtctttgtc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     T T C C C     A
      C G A        A      | | | | |     G
    T       C T C G       A A G G G     C
    A       | | | |                 T T
    G       G A G C
      G T A        G     CGGCC
                    T - A
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.-

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