The detailed information of tRNA gene sequence


Sequence ID>A171002598
Genome IDCP002920
Search identical group
Phylum/ClassEuryarchaeota
SpeciesThermococcus sp. 4557 [CP002920]
Start position on genome 775689
End posion on genome 775604
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gcacgggagt
tRNA gene sequence 
GCCGCGGTAGCCTAGCCTGGTAGGGCGCCGGCCTGCTAAGCCGGTGGCCGTTGGCCACAG
GGGTTCAAATCCCCTCCGCGGCGCCA
Downstream region at tRNA end position 
aaatctttct
Secondary structure (Cloverleaf model)
>A171002598	Ser	GCT
                   t      GCCA aaatctttct
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     T C C C C     A
      C G A        A      | | | | |     A
    C       T C C G       A G G G G     C
    T       + | | |                 T T
    G       G G G C
      G T A        G     TGGCCGTTGGCCAC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK