The detailed information of tRNA gene sequence


Sequence ID>A171002613
Genome IDCP002921
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloarcula hispanica ATCC 33960 CGMCC 1.2049 [CP002921, CP002922]
Start position on genome 772576
End posion on genome 772661
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tagaacgcgt
tRNA gene sequence 
GTCGTGGTAGCCAAGCCTGGCCCAAGGCGCAGGGTTGCTAACTCTGTGGCGTACAGCCTC
CGGGGTTCGAATCCCCGCCACGACGCtc
Downstream region at tRNA end position 
acccatcagt
Secondary structure (Cloverleaf model)
>A171002613	Ser	GCT
                   t      GCtc acccatcagt
                     G - C
                     T - A
                     C - G
                     G - C
                     T - A
                     G - C
                     G - C          T A
                    T     G C C C C     A
    C C G A        A      | | | | |     G
  T         A C C G       C G G G G     C
  G           | | |                 T T
  G         A G G C
    C C C A        G     TGGCGTACAGCCTC
                    C - G
                    A - T
                    G - C
                    G + T
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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