The detailed information of tRNA gene sequence


Sequence ID>A171002616
Genome IDCP002921
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloarcula hispanica ATCC 33960 CGMCC 1.2049 [CP002921, CP002922]
Start position on genome 1337125
End posion on genome 1337199
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
tgagtgcact
tRNA gene sequence 
GGGCCGGTAGCTCAGTCTGGCAGAGCGACGGCCTCTTAAGCCGTCGGTCGAGGGTTCAAA
TCCCTTCCGGCCCGCtt
Downstream region at tRNA end position 
ttgcgacgaa
Secondary structure (Cloverleaf model)
>A171002616	Lys	CTT
                   t      GCtt ttgcgacgaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     T T C C C     A
      T G A        A      + | | | |     A
    C       C T C G       G A G G G     C
    T       | | | |                 T T
    G       G A G C
      G C A        G     CGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.-

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