The detailed information of tRNA gene sequence


Sequence ID>A171002629
Genome IDCP002921
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloarcula hispanica ATCC 33960 CGMCC 1.2049 [CP002921, CP002922]
Start position on genome 2821882
End posion on genome 2821799
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgaaatacgT
tRNA gene sequence 
GCCAGGATGGCCGAACGGTAAGGCGCACGCCTGGAAAGCGTGTTCCCTTTCGGGATTCTG
GGTTCAAATCCCAGTCCTGGCGTtt
Downstream region at tRNA end position 
tctgtgactg
Secondary structure (Cloverleaf model)
>A171002629	Ser	GGA
                   T      GTtt tctgtgactg
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C
                     A - T          T A
                    T     G A C C C     A
        A A        G      | | | | |     A
      C     G C C G       C T G G G     C
      G       | | |                 T T
      G     A G G C
        T A        G     TTCCCTTTCGGGATT
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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