The detailed information of tRNA gene sequence


Sequence ID>A171002638
Genome IDCP002921
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloarcula hispanica ATCC 33960 CGMCC 1.2049 [CP002921, CP002922]
Start position on genome 1909928
End posion on genome 1909855
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
cgagcacggc
tRNA gene sequence 
GCCGGTGTAGCTCAGACTGGCAGAGCGAATCCTTCGTAAGGATTAGGCCGAGGGTTCAAA
TCCCTCCACCGGCTtcc
Downstream region at tRNA end position 
cttttcgaat
Secondary structure (Cloverleaf model)
>A171002638	Thr	CGT
                   c      Ttcc cttttcgaat
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C T C C C     A
      A G A        A      | | | | |     A
    C       C T C G       G A G G G     C
    T       | | | |                 T T
    G       G A G C
      G C A        G     AGGCC
                    A - T
                    A - T
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.-

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