The detailed information of tRNA gene sequence


Sequence ID>A171002647
Genome IDCP002921
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloarcula hispanica ATCC 33960 CGMCC 1.2049 [CP002921, CP002922]
Start position on genome 501070
End posion on genome 500986
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
ttcaatctgc
tRNA gene sequence 
GCGAGGGTAGCCGAGCTTGGCCAAAGGCGGTGGGCTTAAGACCCGCTCCCGTAGGGGTCC
GTGGGTTCGAATCCCATCCCTCGCAttc
Downstream region at tRNA end position 
tgttgcgaac
Secondary structure (Cloverleaf model)
>A171002647	Leu	TAA
                   c      Attc tgttgcgaac
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     T A C C C     A
    T C G A        A      + | | | |     G
  T         G C C G       G T G G G     C
  G           | | |                 T T
  G         A G G C
    C C A A        G     TCCCGTAGGGGTCC
                    G - C
                    T + G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       G
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.-

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