The detailed information of tRNA gene sequence


Sequence ID>A171002655
Genome IDCP002952
Search identical group
Phylum/ClassEuryarchaeota
SpeciesThermococcus sp. AM4 [CP002952]
Start position on genome 1103467
End posion on genome 1103541
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
cgggttcaat
tRNA gene sequence 
GCCGGGATAGCCTAGAGGCGAGGCGAGGGACTGCAGATCCCTTCCACCCGGGTTCAAATC
CCGGTCCCGGCTCCA
Downstream region at tRNA end position 
cccttttcag
Secondary structure (Cloverleaf model)
>A171002655	Cys	GCA
                   t      TCCA cccttttcag
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     G G C C C     A
        G A        A      | | | | |     A
      A     T C C G       C C G G G     C
      G     | | | |                 T T
      G     A G G C
        C G        G     TCCAC
                    A - T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.-

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