The detailed information of tRNA gene sequence


Sequence ID>A171002683
Genome IDCP002952
Search identical group
Phylum/ClassEuryarchaeota
SpeciesThermococcus sp. AM4 [CP002952]
Start position on genome 1225701
End posion on genome 1225624
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgccagctgt
tRNA gene sequence 
GGGCCCGTAGCTCAGCCTGGTCAGAGCGCGCGGCTCATAACCGCGTGGTCGGGGGTTCAA
AGCCCCCCGGGCCCACCA
Downstream region at tRNA end position 
cgaatcactt
Secondary structure (Cloverleaf model)
>A171002683	Met	CAT
                   t      ACCA cgaatcactt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          G A
                    T     C C C C C     A
    C C G A        A      | | | | |     A
  T         C T C G       G G G G G     C
  G         | | | |                 T T
  G         G A G C
    T C A          G     TGGTC
                    C - G
                    G - C
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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