The detailed information of tRNA gene sequence


Sequence ID>A171002704
Genome IDCP003050
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalovivax ruber XH-70 [CP003050]
Start position on genome 1594084
End posion on genome 1594168
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gaccacctgC
tRNA gene sequence 
GGTGGGGTGGCAGAGCGGCCTATTGCGCCTGCCTTGAAAGCAGGTGGCGTCAGCCTCATG
GGTTCAAATCCCATCCCCACCGTCt
Downstream region at tRNA end position 
tttgcgagga
Secondary structure (Cloverleaf model)
>A171002704	Ser	TGA
                   C      GTCt tttgcgagga
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T A C C C     A
      C G A        G      | | | | |     A
    G       G A C G       A T G G G     C
    G       + | | |                 T T
    C       T T G C
      C T A        G     TGGCGTCAGCCTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.-

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