The detailed information of tRNA gene sequence


Sequence ID>A171002707
Genome IDCP003050
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalovivax ruber XH-70 [CP003050]
Start position on genome 2161590
End posion on genome 2161665
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
caggccagac
tRNA gene sequence 
GGGTTGGTAGTCTAGTCTGGTTATGACACCTCCTTGACATGGAGGAGATCGGCAGTTCAA
CTCTGCCCCAACCCACtt
Downstream region at tRNA end position 
ttccgacgct
Secondary structure (Cloverleaf model)
>A171002707	Val	GAC
                   c      ACtt ttccgacgct
                     G - C
                     G - C
                     G - C
                     T - A
                     T - A
                     G - C
                     G - C          T C
                    T     C C G T C     A
    C T G A        A      | | | | |     A
  T         T C T G       G G C A G     C
  G           | | |                 T T
  G         T G A C
    T T A          A     AGATC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.-

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