The detailed information of tRNA gene sequence


Sequence ID>A171002717
Genome IDCP003050
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalovivax ruber XH-70 [CP003050]
Start position on genome 2437217
End posion on genome 2437146
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
caaattccgc
tRNA gene sequence 
GGGCTCGTAGATCAGTGGTAGATCGCTTCCTTCGCAAGGAAGAGGCCCTGGGTTCAAATC
CCAGCGAGTCCAtca
Downstream region at tRNA end position 
gaattcttac
Secondary structure (Cloverleaf model)
>A171002717	Ala	CGC
                   c      Atca gaattcttac
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     G A C C C     A
        G A        A      | | | | |     A
      T     C T A G       C T G G G     C
      G     | | | |                 T T
      G     G A T C
        T A        G     AGGCC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.-

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