The detailed information of tRNA gene sequence


Sequence ID>A171002721
Genome IDCP003050
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalovivax ruber XH-70 [CP003050]
Start position on genome 1792819
End posion on genome 1792736
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tagataccgg
tRNA gene sequence 
GTCGTGGTAGCCAAGCAGGCCCAAGGCGCATGGTTGCTAACCATGTGGCGTCAAGCCTCC
GGGGTTCGAATCCCCGCCACGACGtcc
Downstream region at tRNA end position 
gtaccacaga
Secondary structure (Cloverleaf model)
>A171002721	Ser	GCT
                   g      Gtcc gtaccacaga
                     G - C
                     T - A
                     C - G
                     G - C
                     T - A
                     G - C
                     G - C          T A
                    T     G C C C C     A
    A C G A        A      | | | | |     G
  G         A C C G       C G G G G     C
  G           | | |                 T T
  C         A G G C
    C C A          G     TGGCGTCAAGCCTC
                    C - G
                    A - T
                    T - A
                    G - C
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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