The detailed information of tRNA gene sequence


Sequence ID>A171002789
Genome IDCP003117
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanothrix harundinacea 6Ac [CP003117]
Start position on genome 543970
End posion on genome 544047
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
aaaggctgcc
tRNA gene sequence 
GGGCCCGTAGCTTAGCATGGTTGGAGCGCACGGCTGATAACCGTGAGGTCACGCGTTCGA
ATCGCGTCGGGCCCACCA
Downstream region at tRNA end position 
gaaatccgtt
Secondary structure (Cloverleaf model)
>A171002789	Ile	GAT
                   c      ACCA gaaatccgtt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T G C G C     A
    A C G A        A      | | | | |     G
  T         T T C G       A C G C G     C
  G         + | | |                 T T
  G         G A G C
    T T G          G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.-

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