The detailed information of tRNA gene sequence


Sequence ID>A171002822
Genome IDCP003167
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanoregula formicica SMSP [CP003167]
Start position on genome 485333
End posion on genome 485418
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agattcctct
tRNA gene sequence 
GTTGAGGTAGCCAAGCCTGGTATGGCGCAGGTTTGCTAAACCTGTGTCCCGAAAGGACTC
GAGGGTTCAAATCCCTCCCTCAGCGCtt
Downstream region at tRNA end position 
aaagagataa
Secondary structure (Cloverleaf model)
>A171002822	Ser	GCT
                   t      GCtt aaagagataa
                     G - C
                     T + G
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        A      | | | | |     A
    C       A C C G       G A G G G     C
    T       | | | |                 T T
    G       T G G C
      G T A        G     TGTCCCGAAAGGACTC
                    C - G
                    A - T
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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