The detailed information of tRNA gene sequence


Sequence ID>A171002888
Genome IDCP003168
Search identical group
Phylum/ClassUnclassified
SpeciesAciduliprofundum sp. MAR08-339 [CP003168]
Start position on genome 763829
End posion on genome 763747
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttaccctcag
tRNA gene sequence 
GCGGGGATGGCCGAGCGGTACGGCGATGGCCTGCTAAGCCATTGGGCTGTTGCCCGCGGG
GGTTCGAATCCCCCTCCCCGCGCat
Downstream region at tRNA end position 
cacttttgtt
Secondary structure (Cloverleaf model)
>A171002888	Ser	GCT
                   g      GCat cacttttgtt
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C C C C C     A
        G A        G      | | | | |     G
      C     G C C G       G G G G G     C
      G     | | | |                 T T
      G     C G G C
        T A        G     TGGGCTGTTGCCCGC
                    A - T
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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