The detailed information of tRNA gene sequence


Sequence ID>A171002909
Genome IDCP003243
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanocella conradii HZ254 [CP003243]
Start position on genome 2083338
End posion on genome 2083411
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
aatgtgagcc
tRNA gene sequence 
GGGCCTGTGGTCTAGTTGGTTATGACGTCGCCTTCACACGGCGGAGATCAGGGGTTCGAA
TCCCTTCGGGCCCAtcc
Downstream region at tRNA end position 
ccttttgatt
Secondary structure (Cloverleaf model)
>A171002909	Val	CAC
                   c      Atcc ccttttgatt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T A
                    T     T T C C C     A
      T G A        G      | + | | |     G
    T       T C T G       A G G G G     C
    G         | | |                 T T
    G       T G A C
      T T A        G     AGATC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.-

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