The detailed information of tRNA gene sequence


Sequence ID>A171002944
Genome IDCP003316
Search identical group
Phylum/ClassThermoproteota
SpeciesPyrobaculum oguniense TE7 [CP003316]
Start position on genome 609191
End posion on genome 609263
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
gggtaaagcg
tRNA gene sequence 
GGGCCGGTAGTCTAGCGGAAGGATGCCCGCCTTGCACGCGGGTGATCCCGGGTTCGAATC
CCGGCCGGTCCACtt
Downstream region at tRNA end position 
attacaacca
Secondary structure (Cloverleaf model)
>A171002944	Ala	TGC
                   g      ACtt attacaacca
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
        G A        A      | | | | |     G
      C     T C T G       C C G G G     C
      G     + | | +                 T T
      G     G G A T
        A A        G     TGATC
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.-

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