The detailed information of tRNA gene sequence


Sequence ID>A171002954
Genome IDCP003316
Search identical group
Phylum/ClassThermoproteota
SpeciesPyrobaculum oguniense TE7 [CP003316]
Start position on genome 1401419
End posion on genome 1401347
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
agacggtgct
tRNA gene sequence 
GGGCCCGTAGTCTAGCGGTATGATGCCCGCCTCACGCGCGGGTGGTCCCGGGTTCAAATC
CCGGCGGGCCCACtt
Downstream region at tRNA end position 
ttgaaaaatt
Secondary structure (Cloverleaf model)
>A171002954	Val	CAC
                   t      ACtt ttgaaaaatt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
        G A        A      | | | | |     A
      C     T C T G       C C G G G     C
      G       | | +                 T T
      G     T G A T
        T A        G     TGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       C
                  T       G
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.-

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