The detailed information of tRNA gene sequence


Sequence ID>A171002960
Genome IDCP003316
Search identical group
Phylum/ClassThermoproteota
SpeciesPyrobaculum oguniense TE7 [CP003316]
Start position on genome 314476
End posion on genome 314391
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agtggattca
tRNA gene sequence 
GCCGGGGTGGCCGAGTTGGTCCAAGGCGCGGGCCTGCTAAGCCCGTCCCCGTTCGGGGGC
GTGGGTTCAAATCCCACCCCCGGCGCtt
Downstream region at tRNA end position 
ttccttgtac
Secondary structure (Cloverleaf model)
>A171002960	Ser	GCT
                   a      GCtt ttccttgtac
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
    T T G A        G      | | | | |     A
  G         G C C G       G T G G G     C
  G           | | |                 T T
  T         A G G C
    C C A          G     TCCCCGTTCGGGGGC
                    C - G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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