The detailed information of tRNA gene sequence


Sequence ID>A171003077
Genome IDCP003372
Search identical group
Phylum/ClassEuryarchaeota
SpeciesNatrinema pellirubrum DSM 15624 [CP003372]
Start position on genome 943547
End posion on genome 943473
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
ccgagtgcgc
tRNA gene sequence 
GCCGGAGTAGCTCAGACTGGCAGAGCGAATCCTTCGTAAGGATTAGGTCGAGGGTTCAAA
TCCCTCCTCCGGCTCtt
Downstream region at tRNA end position 
tctgcgacga
Secondary structure (Cloverleaf model)
>A171003077	Thr	CGT
                   c      TCtt tctgcgacga
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C T C C C     A
      A G A        A      | | | | |     A
    C       C T C G       G A G G G     C
    T       | | | |                 T T
    G       G A G C
      G C A        G     AGGTC
                    A - T
                    A - T
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.-

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